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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939272.1_cds_XP_016483936.1_75000
CDS Infomation

[gene=LOC107804540] [db_xref=GeneID:107804540] [protein=protein EARLY FLOWERING 3-like isoform X2] [protein_id=XP_016483936.1] [location=join(66356..66547,67552..67930,68047..68066,68193..68359,70271..70322,70827..71813)] [gbkey=CDS]
Sequence

ATGAAGAGAGGGAAAGGTGAAGAGAAAGTGATGGGGCCAATGTTTCCAAGGCTTCATGTA
AATGATACAGAAAAAGGAGGTCCAAGAGCACCTCCAAGGAACAAGATGGCTTTATATGAG
CAGCTCAGTATACCTTCTCAGAGATTCAATTCAGGGGTTTTGCCTGCTAACTCCAACAAT
AACACTGCAAAGGGTAGTGGGCACGAAAGAGTTGTCTATTTCCCTGTACAACACCCTCCA
TCTGGACATCTTGCTGATAAACCACCTGGCCACAGTTCAGATCCCAATACATTCTTGCAA
CAGTTTGAGTTGAATAAGAGAACAGAAGAGGATGACTTTACGGTTCCTGTCTTTGTTAAC
TCCAAGCCAGATCATGCCACTGGGAGTCATAATCTGGATATGGAAAAGCTCTCTCCCTCT
GGTCCAGTCTTTTCAGGGCATCCCAATAAAGACTTGGAAGGACTTACAGATCGAATTCTG
AGGCAACAGCGCGAGAGCCAGAATGAGGAGAATCCCAAATGTATTCCAGCTAGTAGAGAG
CATAGAACAACCTCAAACTCTCCATCCAAGGAATGCAGATTCGAACGTCAGGAAGACAGG
ATATGTAAATCATTACAAACAGGAATTATGGACCAAGGTGACAACTTATCGGAGACTTCC
ATAGTAGAATCTATGTCTGGAACGGACATCTCTCCTGATGATGTTGTGGGAATAATTGGC
CTAAAGCGTTTCTGGAAAGCCAGAAGAGCAATTGTCAACCAGCAAAGAGTGTTTGCCATT
CAAGTGTTTGAGTTGCATCGACTTATAAAGGTCCAGAAGCTCATTGCCGAGTCACCAAAT
AGTATGCTTGAAGATGCTGGTTATTTAGGCAAACCATTAAAGAATTCCTCTGGTAAAAGA
CTGCCGTTGGAGTGTATTATTAGAGAATCTCAAAGTGTTCCGAAGCGCAAGAATGATTCT
GAGAAGCCTAACTTCAGGATGGAATGCTCTGCTGAAAACACTGTGGGAAAGGCATCTCTT
TCTTCTGTGCAAAATGGTAGCCAGCTCTCTAGCCACAGACCATTTTCAGGAAATCCGCCA
CCAATGCCTGTGACAAATGATGCTAACACGAGTCCCTGGTGCTTCCAACAGCCTCCGGGG
CACCAATGGTTGATCCCAGTGATGTCTCCTTCTGAAGGACTTGTATACAAGCCATTCCCT
GGACCTGGATTTACAAATCCTATTAATGGAGGTTGTGGACCTCCAGGATCGATGGGGAAC
TTTTTTCCTCCAGCTATTGGAGTTCCTGGTCCTCATCCTCACTATCAAGGAACGGGAGTT
CCTTTCGCGCCTCCAACTGGCCACGGCTATTTTCCTCATTATGGCATGCCAGTTATGAAT
CTACCAATCTCATCATCTACCGTCGAAGAATCAAACCAGTTTACTTCGCCGGGTTTTCAA
CGCCAGTTATCTGGAGGGATCGATAACTTTAACATTCAACATCAGGACTCAAGTAATGTT
CCAAGTGAGAAGAATGGAAATGTTCCAGATGTTTTAAGGTTCCAGGCCACCAGAGATAAT
GAGCTACAAGCCAGCACTGCAAGTAGTCCAAGTGAGAGAGCGGCTGACACCACACAAGGA
AGAAACATGCTTTCTCTTTTCCCCACATCTCCAGCTACGGACAACACTGATCATTCAGCA
AGAGTTATCAAAGTTGTACCTCACAATCCAAGGTCTGCCACAGAATCTGCCGCTCGGATA
TTTCAGTCTATACAAGAAGAGAGAAAACAACATGACGCAGCTTTCACTCGTCTGTAG

Peptide Sequence

PEP ID

XP_016483936.1
PEP Infomation

PREDICTED: protein EARLY FLOWERING 3-like isoform X2 [Nicotiana tabacum]
Sequence

MKRGKGEEKVMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRFNSGVLPANSNN
NTAKGSGHERVVYFPVQHPPSGHLADKPPGHSSDPNTFLQQFELNKRTEEDDFTVPVFVN
SKPDHATGSHNLDMEKLSPSGPVFSGHPNKDLEGLTDRILRQQRESQNEENPKCIPASRE
HRTTSNSPSKECRFERQEDRICKSLQTGIMDQGDNLSETSIVESMSGTDISPDDVVGIIG
LKRFWKARRAIVNQQRVFAIQVFELHRLIKVQKLIAESPNSMLEDAGYLGKPLKNSSGKR
LPLECIIRESQSVPKRKNDSEKPNFRMECSAENTVGKASLSSVQNGSQLSSHRPFSGNPP
PMPVTNDANTSPWCFQQPPGHQWLIPVMSPSEGLVYKPFPGPGFTNPINGGCGPPGSMGN
FFPPAIGVPGPHPHYQGTGVPFAPPTGHGYFPHYGMPVMNLPISSSTVEESNQFTSPGFQ
RQLSGGIDNFNIQHQDSSNVPSEKNGNVPDVLRFQATRDNELQASTASSPSERAADTTQG
RNMLSLFPTSPATDNTDHSARVIKVVPHNPRSATESAARIFQSIQEERKQHDAAFTRL

Transcript Sequence

Gene sequence data has not been registered.